X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP292100 mM HEPES, 0.1 M NaAc pH 6.6, 22% PEG 3350
Crystal Properties
Matthews coefficientSolvent content
2.0941.26

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.54α = 90
b = 154.74β = 90
c = 91.36γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER X 16M2021-07-05MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06SA1.0SLSX06SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.555099.10.02922.54.555924
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.551.6599.90.5652.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.5544.8253121279699.070.162170.161250.17992RANDOM29.079
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.43-3.035.46
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.192
r_dihedral_angle_4_deg18.488
r_dihedral_angle_3_deg12.665
r_dihedral_angle_1_deg6.448
r_long_range_B_refined1.714
r_long_range_B_other1.714
r_angle_other_deg1.185
r_angle_refined_deg1.161
r_scangle_other1.03
r_mcangle_it0.978
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.192
r_dihedral_angle_4_deg18.488
r_dihedral_angle_3_deg12.665
r_dihedral_angle_1_deg6.448
r_long_range_B_refined1.714
r_long_range_B_other1.714
r_angle_other_deg1.185
r_angle_refined_deg1.161
r_scangle_other1.03
r_mcangle_it0.978
r_mcangle_other0.978
r_scbond_it0.796
r_scbond_other0.795
r_mcbond_it0.746
r_mcbond_other0.744
r_rigid_bond_restr0.477
r_chiral_restr0.053
r_gen_planes_refined0.004
r_bond_refined_d0.003
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3039
Nucleic Acid Atoms
Solvent Atoms334
Heterogen Atoms21

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
REFMACphasing