8K31
The complex of WRKY33 C terminal DBD and SIB1
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 30 mM MES, 50 mM sodium chloride, 20 uM ZINC ION | 90% H2O/10% D2O | 50 mM | 6.0 | 1 atm | 298 | Bruker AVANCE III 600 |
2 | 2D 1H-15N HSQC | 30 mM MES, 50 mM sodium chloride, 20 uM ZINC ION | 90% H2O/10% D2O | 50 mM | 6.0 | 1 atm | 298 | Bruker AVANCE III 850 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 600 |
2 | Bruker | AVANCE III | 850 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics | Amber |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 240 |
Conformers Submitted Total Number | 20 |
Representative Model | 20 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | CcpNmr Analysis | CCPN | |
2 | structure calculation | Amber | Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman | |
3 | refinement | Amber | Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman |