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NMR solution structure of subunit epsilon of the Acinetobacter baumannii F-ATP synthase
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-100% 15N] A. baumannii F-ATP synthase subunit epsilon, 20 mM sodium phosphate, 100 mM sodium chloride, 0.01 % w/v sodium azide 90% H2O/10% D2O 100 mM 7 1 atm 298 Bruker AVANCE 700 2 3D HNCACB 0.5 mM [U-100% 15N] A. baumannii F-ATP synthase subunit epsilon, 20 mM sodium phosphate, 100 mM sodium chloride, 0.01 % w/v sodium azide 90% H2O/10% D2O 100 mM 7 1 atm 298 Bruker AVANCE 700 3 3D CBCA(CO)NH 0.5 mM [U-100% 15N] A. baumannii F-ATP synthase subunit epsilon, 20 mM sodium phosphate, 100 mM sodium chloride, 0.01 % w/v sodium azide 90% H2O/10% D2O 100 mM 7 1 atm 298 Bruker AVANCE 700 4 3D HNCA 0.5 mM [U-100% 15N] A. baumannii F-ATP synthase subunit epsilon, 20 mM sodium phosphate, 100 mM sodium chloride, 0.01 % w/v sodium azide 90% H2O/10% D2O 100 mM 7 1 atm 298 Bruker AVANCE 700 5 3D HN(CO)CA 0.5 mM [U-100% 15N] A. baumannii F-ATP synthase subunit epsilon, 20 mM sodium phosphate, 100 mM sodium chloride, 0.01 % w/v sodium azide 90% H2O/10% D2O 100 mM 7 1 atm 298 Bruker AVANCE 700 6 3D 1H-15N NOESY 0.5 mM [U-100% 15N] A. baumannii F-ATP synthase subunit epsilon, 20 mM sodium phosphate, 100 mM sodium chloride, 0.01 % w/v sodium azide 90% H2O/10% D2O 100 mM 7 1 atm 298 Bruker AVANCE 700 7 3D HCCH-TOCSY 0.5 mM [U-100% 15N] A. baumannii F-ATP synthase subunit epsilon, 20 mM sodium phosphate, 100 mM sodium chloride, 0.01 % w/v sodium azide 100% D2O 100 mM 7 1 atm 298 Bruker AVANCE 700 8 3D 1H-13C NOESY 0.5 mM [U-100% 15N] A. baumannii F-ATP synthase subunit epsilon, 20 mM sodium phosphate, 100 mM sodium chloride, 0.01 % w/v sodium azide 100% D2O 100 mM 7 1 atm 298 Bruker AVANCE 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 21 Representative Model 1 (minimized average structure)
Computation: NMR Software # Classification Version Software Name Author 5 collection TopSpin Bruker Biospin 6 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 7 processing NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 data analysis Sparky Goddard 4 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 8 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read