8CHH

SH3 domain solved by the exact solid-state method from the Bruker Dynamics Center using the correction method for spin-diffusion with PDB 2NUZ as reference


SOLID-STATE NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D S2B pulse sequence with MOCCA-mixing between carbons1 na [U-100% 13C; U-100% 15N] SH3 of chicken alpha-spectrin100% H2O0 M71 atm298Bruker AVANCE NEO 700
25D S2B combined with a simultaneous 4D HCCH1 na [U-100% 13C; U-100% 15N] SH3 of chicken alpha-spectrin100% H2O0 M71 atm298Bruker AVANCE NEO 700
315 time-shared 15N/13C-edited H-RFDR-h(N/C)H RFDR pulse sequence with 1H-1H homonuclear mixing times from 150 us to 1.9 ms1 na [U-100% 13C; U-100% 15N] SH3 of chicken alpha-spectrin100% H2O0 M71 atm298Bruker AVANCE NEO 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE NEO800
2BrukerAVANCE NEO700
NMR Refinement
MethodDetailsSoftware
simulated annealingWater refinement of the 10 lowest energy structuresARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementARIA2.3Linge, O'Donoghue and Nilges
2chemical shift assignmentCcpNmr Analysis2.5.2Wim F. Vranken, Wayne Boucher, Tim J. Stevens, Rasmus H. Fogh, Anne Pajon, Miguel Llinas, Eldon L. Ulrich, John L. Markley, John Ionides, Ernest D. Laue
3structure calculationARIA2.3Linge, O'Donoghue and Nilges
4peak pickingCcpNmr Analysis2.5.2Wim F. Vranken, Wayne Boucher, Tim J. Stevens, Rasmus H. Fogh, Anne Pajon, Miguel Llinas, Eldon L. Ulrich, John L. Markley, John Ionides, Ernest D. Laue