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Type1 alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Refinement RMS Deviations Key Refinement Restraint Deviation r_long_range_B_other 18.188 r_long_range_B_refined 18.166 r_scangle_other 13.82 r_dihedral_angle_3_deg 10.748 r_mcangle_it 8.62 r_mcangle_other 8.613 r_scbond_it 8.283 r_scbond_other 8.28 r_dihedral_angle_1_deg 7.095 r_mcbond_it 5.985
RMS Deviations Key Refinement Restraint Deviation r_long_range_B_other 18.188 r_long_range_B_refined 18.166 r_scangle_other 13.82 r_dihedral_angle_3_deg 10.748 r_mcangle_it 8.62 r_mcangle_other 8.613 r_scbond_it 8.283 r_scbond_other 8.28 r_dihedral_angle_1_deg 7.095 r_mcbond_it 5.985 r_mcbond_other 5.985 r_angle_refined_deg 1.278 r_angle_other_deg 0.539 r_chiral_restr 0.066 r_bond_refined_d 0.006 r_gen_planes_refined 0.006 r_gen_planes_other 0.003 r_bond_other_d 0.001 r_dihedral_angle_2_deg r_dihedral_angle_4_deg r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample Alpha-synuclein filament assembled in vitro by wild-type and mutant (7 residues insertion) protein
Specimen Preparation Sample Aggregation State FILAMENT Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method HELICAL Number of Particles 178778 Reported Resolution (Å) 2.7 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type HELICAL Axial Symmetry C1 Axial Rise 4.76 Angular Rotation -1.58
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON IV (4k x 4k) Electron Dose (electrons/Å**2) 40
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 1000 Maximum Defocus (nm) 2500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION EPU CTF CORRECTION RELION MODEL FITTING Coot MODEL REFINEMENT REFMAC INITIAL EULER ASSIGNMENT RELION FINAL EULER ASSIGNMENT RELION RECONSTRUCTION RELION
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION