8AV7

Small molecular stabilizer for ERalpha and 14-3-3 (1074202 - non covalent)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2770.095 M HEPES (pH 7.1), PEG400 (24% (v/v)), 0.19 M CaCl2 and 5% (v/v) Glycerol
Crystal Properties
Matthews coefficientSolvent content
2.6353.15

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 81.977α = 90
b = 111.839β = 90
c = 62.521γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER X 16M2019-09-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I030.976254DiamondI03

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.445.4399.9121.712.856798
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.41.420.879

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT4JC31.445.4353935284099.880.149740.148610.17073RANDOM18.737
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.49-1.04-1.45
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.827
r_dihedral_angle_4_deg14.836
r_dihedral_angle_3_deg10.311
r_dihedral_angle_1_deg4.403
r_long_range_B_refined2.876
r_long_range_B_other2.509
r_scangle_other1.806
r_rigid_bond_restr1.432
r_mcangle_it1.376
r_mcangle_other1.375
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.827
r_dihedral_angle_4_deg14.836
r_dihedral_angle_3_deg10.311
r_dihedral_angle_1_deg4.403
r_long_range_B_refined2.876
r_long_range_B_other2.509
r_scangle_other1.806
r_rigid_bond_restr1.432
r_mcangle_it1.376
r_mcangle_other1.375
r_scbond_it1.36
r_scbond_other1.36
r_angle_refined_deg1.342
r_angle_other_deg1.289
r_mcbond_other0.989
r_mcbond_it0.988
r_chiral_restr0.085
r_bond_refined_d0.009
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1899
Nucleic Acid Atoms
Solvent Atoms270
Heterogen Atoms28

Software

Software
Software NamePurpose
REFMACrefinement
DIALSdata reduction
Aimlessdata scaling
MOLREPphasing