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S-layer protein SlaA from Sulfolobus acidocaldarius at pH 7.0
Refinement RMS Deviations Key Refinement Restraint Deviation r_lrange_it 70.914 r_scangle_it 48.884 r_dihedral_angle_4_deg 39.856 r_dihedral_angle_2_deg 37.29 r_mcangle_it 35.853 r_scbond_it 28.231 r_mcbond_it 21.863 r_dihedral_angle_3_deg 12.877 r_dihedral_angle_1_deg 8.143 r_angle_refined_deg 1.909
RMS Deviations Key Refinement Restraint Deviation r_lrange_it 70.914 r_scangle_it 48.884 r_dihedral_angle_4_deg 39.856 r_dihedral_angle_2_deg 37.29 r_mcangle_it 35.853 r_scbond_it 28.231 r_mcbond_it 21.863 r_dihedral_angle_3_deg 12.877 r_dihedral_angle_1_deg 8.143 r_angle_refined_deg 1.909 r_nbtor_refined 0.31 r_nbd_refined 0.198 r_xyhbond_nbd_refined 0.121 r_chiral_restr 0.113 r_gen_planes_refined 0.009 r_bond_refined_d 0.008
Sample Monomeric S-layer protein SlaA with N-glycosylation
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details Grid type: lacey with graphene oxide
Blotting paper: Whatman 597
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 90965 Reported Resolution (Å) 3.9 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol AB INITIO MODEL Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 59.12
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TALOS ARCTICA Minimum Defocus (nm) 1200 Maximum Defocus (nm) 2400 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 130000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION 3.1 IMAGE ACQUISITION EPU MODEL FITTING Coot MODEL FITTING UCSF Chimera MODEL FITTING UCSF ChimeraX MODEL FITTING ISOLDE MODEL REFINEMENT REFMAC
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 1016259