8AB1

Crystal structure of the PulL-PulM C-terminal domain heterocomplex


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION2910%w/v PEG 3350, 0.2M KCl
Crystal Properties
Matthews coefficientSolvent content
3.3262.96

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 117.899α = 90
b = 117.899β = 90
c = 110.002γ = 120
Symmetry
Space GroupP 63 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER X 16M2021-07-23MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSOLEIL BEAMLINE PROXIMA 10.987SOLEILPROXIMA 1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.77102.1041000.0990.1010.0160.9992538.811982
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.772.8191001.9822.0070.3110.8342.341.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTNMR models2.77102.11140158199.940.272770.271730.29278RANDOM122.794
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.19-0.1-0.190.63
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.539
r_dihedral_angle_3_deg18.315
r_dihedral_angle_4_deg17.55
r_dihedral_angle_1_deg7.477
r_long_range_B_refined4.906
r_long_range_B_other4.861
r_mcangle_it1.708
r_mcangle_other1.708
r_scangle_other1.469
r_angle_refined_deg1.426
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.539
r_dihedral_angle_3_deg18.315
r_dihedral_angle_4_deg17.55
r_dihedral_angle_1_deg7.477
r_long_range_B_refined4.906
r_long_range_B_other4.861
r_mcangle_it1.708
r_mcangle_other1.708
r_scangle_other1.469
r_angle_refined_deg1.426
r_angle_other_deg1.148
r_mcbond_it0.985
r_mcbond_other0.985
r_scbond_it0.861
r_scbond_other0.861
r_chiral_restr0.114
r_bond_refined_d0.009
r_gen_planes_refined0.004
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2326
Nucleic Acid Atoms
Solvent Atoms21
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
PHASERphasing
AutoProcessdata scaling
AutoProcessdata reduction