7F19

Structure of the G304E mutant of CueO

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	3OD3

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP		293	PEG 3350, KNO3

Crystal Properties
Matthews coefficient	Solvent content
2.03	39.39

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 76.892	α = 90
b = 62.287	β = 96.153
c = 96.653	γ = 90

Symmetry
Space Group	C 1 2 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS EIGER X 9M		2021-01-27	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SPRING-8 BEAMLINE BL32XU	1.00000	SPring-8	BL32XU

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	Rrim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.77	48.993	97.8	0.198	0.97	3.95	1.79		43540

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	Rrim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.77	1.88	95.1		1.288	0.466	0.48

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	3od3	1.773	48.335	43540	2225	98.605	0.208	0.2056	0.2533	43.305

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.362		-0.971	-0.171		0.018

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	35.212
r_dihedral_angle_4_deg	17.325
r_dihedral_angle_3_deg	16.055
r_dihedral_angle_1_deg	8.169
r_lrange_it	7.787
r_lrange_other	7.776
r_scangle_other	5.788
r_scangle_it	5.783
r_mcangle_it	4.593
r_mcangle_other	4.593
r_scbond_it	3.911
r_scbond_other	3.91
r_mcbond_other	3.463
r_mcbond_it	3.462
r_angle_refined_deg	1.589
r_angle_other_deg	1.235
r_nbd_other	0.211
r_symmetry_nbd_refined	0.209
r_nbd_refined	0.2
r_symmetry_nbd_other	0.18
r_nbtor_refined	0.157
r_xyhbond_nbd_refined	0.147
r_symmetry_xyhbond_nbd_refined	0.114
r_symmetry_xyhbond_nbd_other	0.101
r_metal_ion_refined	0.101
r_symmetry_nbtor_other	0.079
r_chiral_restr	0.065
r_bond_refined_d	0.009
r_gen_planes_refined	0.007
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3417
Nucleic Acid Atoms
Solvent Atoms	186
Heterogen Atoms	45

Software

Software
Software Name	Purpose
REFMAC	refinement
DIALS	data reduction
XSCALE	data scaling
BALBES	phasing