7A6X

Structure of the FKBP51FK1 domain in complex with the macrocyclic SAFit analogue 56

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	4TW7

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	7.5	293	30% PEG-3350, 0.2 M NH4-acetate and 0.1 M HEPES-NaOH pH 7.5

Crystal Properties
Matthews coefficient	Solvent content
1.78	30.88

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 34.565	α = 90
b = 47.821	β = 90
c = 61.468	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M		2019-06-06	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	BESSY BEAMLINE 14.1	0.918400	BESSY	14.1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.4	30.73	95	0.073	0.087	0.046	0.996	10.7	6.2		19573

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.4	1.42	96.1		1.061	1.261	0.675	0.642		6.3

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	4TW7	1.67	20.001	11681	565	94.537	0.153	0.1505	0.1985	17.831

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.746			0.174		-0.92

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	28.871
r_dihedral_angle_4_deg	16.751
r_dihedral_angle_3_deg	14.408
r_dihedral_angle_1_deg	7.454
r_lrange_it	2.981
r_lrange_other	2.95
r_mcangle_it	2.285
r_mcangle_other	2.283
r_scangle_it	2.198
r_scangle_other	2.196
r_scbond_it	1.724
r_scbond_other	1.723
r_mcbond_other	1.688
r_mcbond_it	1.687
r_angle_refined_deg	1.594
r_angle_other_deg	1.509
r_chiral_restr_other	1.208
r_rigid_bond_restr	0.945
r_nbd_other	0.258
r_symmetry_nbd_refined	0.256
r_nbd_refined	0.194
r_symmetry_nbd_other	0.18
r_nbtor_refined	0.167
r_xyhbond_nbd_refined	0.13
r_symmetry_xyhbond_nbd_refined	0.115
r_symmetry_nbtor_other	0.075
r_chiral_restr	0.054
r_bond_refined_d	0.008
r_bond_other_d	0.005
r_gen_planes_refined	0.005
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	890
Nucleic Acid Atoms
Solvent Atoms	50
Heterogen Atoms	52

Software

Software
Software Name	Purpose
REFMAC	refinement
REFMAC	refinement
DIALS	data collection
Aimless	data reduction
Aimless	data scaling
PHASER	phasing