Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
Dicing state of mouse somatic dicer with pre-mir-15a
Sample Components
Dicing state of mouse somatic dicer
Pre-mir-15a
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
Described in STAR methods
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
64038
Reported Resolution (Å)
5.91
Resolution Method
FSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
Id
1 (7YYN, 7YYN)
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
Ramachandran Plot, Rotamer Analysis, Density Fit Analysis, Correlation coefficient
Overall B Value
520
Fitting Procedure
Details
We used our previous deposition 7YYN as an initial model source. Initial local fitting was done using Chimera. ISOLDE was used for flexible fitting wi ...
We used our previous deposition 7YYN as an initial model source. Initial local fitting was done using Chimera. ISOLDE was used for flexible fitting with torsion restraints defined for polypeptide chain and distance restraints for polyribonucleotides.