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Human Lysophosphatidic Acid Receptor 1-Gi complex bound to ONO-0740556, state3
Refinement RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 81.016 r_long_range_B_other 81.016 r_scangle_other 62.864 r_mcangle_other 57.086 r_mcangle_it 57.085 r_scbond_it 41.368 r_scbond_other 41.356 r_mcbond_it 38.145 r_mcbond_other 38.098 r_dihedral_angle_2_deg 31.047
RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 81.016 r_long_range_B_other 81.016 r_scangle_other 62.864 r_mcangle_other 57.086 r_mcangle_it 57.085 r_scbond_it 41.368 r_scbond_other 41.356 r_mcbond_it 38.145 r_mcbond_other 38.098 r_dihedral_angle_2_deg 31.047 r_dihedral_angle_3_deg 16.24 r_dihedral_angle_4_deg 12.338 r_dihedral_angle_1_deg 6.063 r_angle_refined_deg 1.824 r_angle_other_deg 1.744 r_chiral_restr 0.08 r_bond_other_d 0.017 r_bond_refined_d 0.016 r_gen_planes_refined 0.01 r_gen_planes_other 0.004 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample Human Lysophosphatidic Acid Receptor 1-Gi complex bound to ONO-0740556 Sample Components Guanine nucleotide-binding protein G(i) subunit alpha-1 Lysophosphatidic Acid Receptor 1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 scFv16
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 55709 Reported Resolution (Å) 4.5 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 50
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 500 Maximum Defocus (nm) 2500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION