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Human Lysophosphatidic Acid Receptor 1-Gi complex bound to ONO-0740556, state1
Refinement RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 40.133 r_long_range_B_other 40.132 r_scangle_other 31.203 r_dihedral_angle_2_deg 30.897 r_mcangle_it 24.955 r_mcangle_other 24.954 r_scbond_it 19.847 r_scbond_other 19.845 r_mcbond_it 16.884 r_mcbond_other 16.884
RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 40.133 r_long_range_B_other 40.132 r_scangle_other 31.203 r_dihedral_angle_2_deg 30.897 r_mcangle_it 24.955 r_mcangle_other 24.954 r_scbond_it 19.847 r_scbond_other 19.845 r_mcbond_it 16.884 r_mcbond_other 16.884 r_dihedral_angle_3_deg 15.333 r_dihedral_angle_4_deg 13.278 r_dihedral_angle_1_deg 5.635 r_angle_other_deg 1.654 r_angle_refined_deg 1.591 r_chiral_restr 0.078 r_bond_other_d 0.032 r_bond_refined_d 0.015 r_gen_planes_refined 0.009 r_gen_planes_other 0.003 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Sample Human Lysophosphatidic Acid Receptor 1-Gi complex bound to ONO-0740556 Sample Components Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Guanine nucleotide-binding protein G(i) subunit alpha-1 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 Lysophosphatidic Acid Receptor 1 scFv16
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 129275 Reported Resolution (Å) 3.7 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 50
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 500 Maximum Defocus (nm) 2500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION