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Structure of hypothetical protein TTHA1873 from Thermus thermophilus
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 277 0.1 M Tris pH 8.5 and 3.0 M Sodium chloride
Crystal Properties Matthews coefficient Solvent content 1.89 34.87
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.18 α = 90 b = 42.18 β = 90 c = 156.89 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate 2017-06-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.78 52.3 100 0.995 12.6 11.8 14566
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.78 1.81 0.98
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.78 40.77 13757 732 99.97 0.1642 0.1624 0.176 0.1985 0.2058 RANDOM 13.743
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.26 0.26 -0.53
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.753 r_dihedral_angle_4_deg 11.654 r_dihedral_angle_3_deg 9.84 r_dihedral_angle_1_deg 7.411 r_angle_refined_deg 1.827 r_angle_other_deg 1.603 r_chiral_restr 0.094 r_bond_refined_d 0.015 r_gen_planes_refined 0.011 r_bond_other_d 0.001
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.753 r_dihedral_angle_4_deg 11.654 r_dihedral_angle_3_deg 9.84 r_dihedral_angle_1_deg 7.411 r_angle_refined_deg 1.827 r_angle_other_deg 1.603 r_chiral_restr 0.094 r_bond_refined_d 0.015 r_gen_planes_refined 0.011 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1181 Nucleic Acid Atoms Solvent Atoms 125 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction iMOSFLM data reduction Aimless data scaling CRANK2 phasing