7VTN

Cryo-EM structure of the Cas13bt3-crRNA-target RNA ternary complex


ELECTRON MICROSCOPY

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP

Refinement

RMS Deviations
KeyRefinement Restraint Deviation
r_long_range_B_refined16.924
r_dihedral_angle_3_deg14.931
r_dihedral_angle_1_deg5.931
r_mcangle_it3.742
r_dihedral_angle_2_deg2.114
r_mcbond_it1.986
r_angle_refined_deg1.498
r_scbond_it1.2
r_chiral_restr0.14
r_bond_refined_d0.008
RMS Deviations
KeyRefinement Restraint Deviation
r_long_range_B_refined16.924
r_dihedral_angle_3_deg14.931
r_dihedral_angle_1_deg5.931
r_mcangle_it3.742
r_dihedral_angle_2_deg2.114
r_mcbond_it1.986
r_angle_refined_deg1.498
r_scbond_it1.2
r_chiral_restr0.14
r_bond_refined_d0.008
r_gen_planes_refined0.006
r_bond_other_d
r_angle_other_deg
r_dihedral_angle_4_deg
r_gen_planes_other
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_it
r_scangle_other
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Sample
Cas13bt3-crRNA-target RNA
Sample Components
crRNA-target RNA
Cas13bt3
Specimen Preparation
Sample Aggregation StatePARTICLE
Vitrification Instrument
Cryogen NameETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodSINGLE PARTICLE
Number of Particles2380559
Reported Resolution (Å)3.38
Resolution MethodFSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry TypePOINT
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeGATAN K3 BIOQUANTUM (6k x 4k)
Electron Dose (electrons/Å**2)48.1
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelFEI TITAN KRIOS
Minimum Defocus (nm)800
Maximum Defocus (nm)1600
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION