SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY1 mM RNA (70-MER), 10 mM potassium phosphate95% H2O/5% D2O50 mM6.51 atm298Bruker AVANCE III 800
22D 1H-1H TOCSY1 mM RNA (70-MER), 10 mM potassium phosphate95% H2O/5% D2O50 mM6.51 atm298Bruker AVANCE III 800
32D 1H-1H NOESY1 mM [U-2H] RNA (70-MER), 10 mM potassium phosphate100% D2O50 mM6.51 atm298Bruker AVANCE III 800
42D 1H-1H TOCSY1 mM [U-2H] RNA (70-MER), 10 mM potassium phosphate100% D2O50 mM6.51 atm298Bruker AVANCE III 800
52D 1H-1H NOESY1 mM RNA (70-MER), 10 mM potassium phosphate100% D2O50 mM6.51 atm298Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
2BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number400
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingTopSpinBruker Biospin
3peak pickingNMRFAM-SPARKYLee W, Tonelli M, Markley JL
4refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
5structure calculationX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore