☰ Navigation Tabs
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-02
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 5.345 f_angle_d 0.849 f_chiral_restr 0.048 f_bond_d 0.008 f_plane_restr 0.005
Sample Cov2 Spike timer in complex with monoclonal antibody Sample Components Spike glycoprotein mAb 002-02 light chain, mAb 002-02 Heavy chain
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details 20 second wait time and 3 seconds blot time
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 452356 Reported Resolution (Å) 3.86 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target correlation coefficient Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 63.81
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 600 Maximum Defocus (nm) 2700 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 81000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC 3.2.0 CTF CORRECTION cryoSPARC 3.2.0 MODEL FITTING UCSF ChimeraX INITIAL EULER ASSIGNMENT cryoSPARC 3.2.0 FINAL EULER ASSIGNMENT cryoSPARC 3.2.0 CLASSIFICATION cryoSPARC 3.2.0 RECONSTRUCTION cryoSPARC 3.2.0 MODEL REFINEMENT PHENIX
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 4065022