Two-state solution NMR structure of Pin1 bound to peptide pCDC25c
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D 1H-13C NOESY | 750 uM [U-99% 13C; U-99% 15N] Pin1, 4 mM pCDC25c, 20 mM NaPO4, 50 mM sodium chloride, 0.03 % sodium azide, 5 mM DTT | 95% H2O/5% D2O | 50 mM | 6.5 | 1 Pa | 298 | Varian INOVA 900 |
| 2 | 3D 1H-15N NOESY | 750 uM [U-99% 13C; U-99% 15N] Pin1, 4 mM pCDC25c, 20 mM NaPO4, 50 mM sodium chloride, 0.03 % sodium azide, 5 mM DTT | 95% H2O/5% D2O | 50 mM | 6.5 | 1 Pa | 298 | Varian INOVA 900 |
| 3 | 2D 1H-13C HSQC | 750 uM [U-99% 13C; U-99% 15N] Pin1, 4 mM pCDC25c, 20 mM NaPO4, 50 mM sodium chloride, 0.03 % sodium azide, 5 mM DTT | 95% H2O/5% D2O | 50 mM | 6.5 | 1 Pa | 298 | Varian INOVA 900 |
| 4 | 2D 1H-15N HSQC | 750 uM [U-99% 13C; U-99% 15N] Pin1, 4 mM pCDC25c, 20 mM NaPO4, 50 mM sodium chloride, 0.03 % sodium azide, 5 mM DTT | 95% H2O/5% D2O | 50 mM | 6.5 | 1 Pa | 298 | Varian INOVA 900 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 900 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | CYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 400 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (fewest violations) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | CYANA | Guntert P. | |
| 2 | chemical shift assignment | CcpNmr Analysis | CCPN | |
| 3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 4 | data analysis | CcpNmr Analysis | CCPN | |
| 5 | structure calculation | CYANA | Guntert P. | |














