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CryoEM structure of human enterovirus 70 A-particle
Refinement RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.613 r_dihedral_angle_3_deg 14.367 r_dihedral_angle_4_deg 13.57 r_dihedral_angle_1_deg 5.685 r_long_range_B_refined 3.087 r_long_range_B_other 3.087 r_angle_other_deg 1.195 r_angle_refined_deg 1.107 r_mcangle_it 0.627 r_mcangle_other 0.627
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.613 r_dihedral_angle_3_deg 14.367 r_dihedral_angle_4_deg 13.57 r_dihedral_angle_1_deg 5.685 r_long_range_B_refined 3.087 r_long_range_B_other 3.087 r_angle_other_deg 1.195 r_angle_refined_deg 1.107 r_mcangle_it 0.627 r_mcangle_other 0.627 r_mcbond_it 0.327 r_mcbond_other 0.327 r_scangle_other 0.26 r_scbond_it 0.098 r_scbond_other 0.098 r_chiral_restr 0.047 r_gen_planes_refined 0.004 r_bond_refined_d 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 1350 Reported Resolution (Å) 3.73 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry I
Map-Model Fitting and Refinement Id 1 Refinement Space RECIPROCAL Refinement Protocol FLEXIBLE FIT Refinement Target Overall B Value 76 Fitting Procedure Details
Data Acquisition Detector Type FEI FALCON II (4k x 4k) Electron Dose (electrons/Å**2) 48
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 1000 Maximum Defocus (nm) 3000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 75000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION EPU 1.8 CTF CORRECTION Gctf CTF CORRECTION RELION 3.1 MODEL FITTING UCSF Chimera MODEL FITTING Coot INITIAL EULER ASSIGNMENT RELION 3.1 FINAL EULER ASSIGNMENT RELION 3.1 CLASSIFICATION RELION 3.1 RECONSTRUCTION RELION 3.1 MODEL REFINEMENT PHENIX MODEL REFINEMENT REFMAC
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 10524 autopicking