7OAF

conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A, crystal form III


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2940.1M tri-sodium citrate pH 4.5, 9.3% PEG 6000
Crystal Properties
Matthews coefficientSolvent content
2.1442.59

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 26.01α = 90
b = 38.849β = 96.178
c = 128.811γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER2 X 16M2020-06-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X10SA0.9998SLSX10SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.4533.21499.80.083111.326.6245592
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.451.5499.40.8350.961.776.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE R-VALUE7OAA1.4533.21445563227999.7240.1990.19830.21530.036
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.3391.8090.3-0.344
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.897
r_dihedral_angle_4_deg20.476
r_dihedral_angle_3_deg14.588
r_lrange_it7.532
r_lrange_other7.479
r_scangle_it4.908
r_scangle_other4.907
r_dihedral_angle_1_deg3.946
r_scbond_it3.191
r_scbond_other3.189
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.897
r_dihedral_angle_4_deg20.476
r_dihedral_angle_3_deg14.588
r_lrange_it7.532
r_lrange_other7.479
r_scangle_it4.908
r_scangle_other4.907
r_dihedral_angle_1_deg3.946
r_scbond_it3.191
r_scbond_other3.189
r_mcangle_it2.111
r_mcangle_other2.11
r_angle_refined_deg1.654
r_mcbond_it1.541
r_mcbond_other1.536
r_angle_other_deg1.396
r_symmetry_nbd_refined0.293
r_nbd_refined0.257
r_nbd_other0.229
r_nbtor_refined0.197
r_xyhbond_nbd_refined0.182
r_ncsr_local_group_20.169
r_symmetry_nbd_other0.154
r_symmetry_xyhbond_nbd_refined0.154
r_ncsr_local_group_30.15
r_ncsr_local_group_10.148
r_chiral_restr0.089
r_symmetry_nbtor_other0.084
r_symmetry_xyhbond_nbd_other0.031
r_bond_refined_d0.018
r_gen_planes_refined0.01
r_bond_other_d0.007
r_gen_planes_other0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2034
Nucleic Acid Atoms
Solvent Atoms198
Heterogen Atoms16

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XDSdata scaling
MOLREPphasing