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Dimeric Photosystem I of a temperature sensitive mutant Chlamydomonas reinhardtii
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6JO5
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.2539 f_angle_d 0.7673 f_chiral_restr 0.0495 f_plane_restr 0.0059 f_bond_d 0.0046
Sample Photosystem I of temperature sensitive Chlamydomonas reinhardtii
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 5707 Reported Resolution (Å) 17.1 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 (6JO5) Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 BIOQUANTUM (6k x 4k) Electron Dose (electrons/Å**2) 46.8
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 165000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION 3.0.7 IMAGE ACQUISITION EPU CTF CORRECTION CTFFIND 4.1 MODEL FITTING PHENIX MODEL REFINEMENT PHENIX INITIAL EULER ASSIGNMENT RELION 3.0.7 FINAL EULER ASSIGNMENT RELION 3.0.7 CLASSIFICATION RELION RECONSTRUCTION RELION 3.0.7
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details NONE 1208518