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Vibrio cholerae ParA2-ADP
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 7NPD
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 277.15 24 %w/v PEG 1500, 20% w/v glycerol
Crystal Properties Matthews coefficient Solvent content 4.01 69.32
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 199.205 α = 90 b = 199.205 β = 90 c = 260.066 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 80 PIXEL DECTRIS EIGER2 XE 16M 2019-07-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.9762 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.18 52.59 96.38 0.02072 0.98 2 49709 128.81
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.184 3.298 66.68 0.5636
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 7NPD 3.2 52.59 1.34 49236 2436 97.05 0.24 0.238 0.2377 0.2779 0.2713 126.2909
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11921 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 124
Software Software Software Name Purpose PHENIX refinement autoPROC data scaling PHASER phasing PDB_EXTRACT data extraction autoPROC data reduction