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Monomeric single-particle reconstruction of the Yeast gamma-TuSC
Sample Monomer of the Yeast gamma-TuSC
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details Whatman #1 Filter papers used.
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 398841 Reported Resolution (Å) 3.7 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol OTHER Refinement Target Overall B Value 164 Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 76
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI POLARA 300 Minimum Defocus (nm) 400 Maximum Defocus (nm) 1000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2 Imaging Mode BRIGHT FIELD Specimen Holder Model OTHER Nominal Magnification 31000 Calibrated Magnification 39891 Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cisTEM 1.0 beta IMAGE ACQUISITION SerialEM IMAGE ACQUISITION Leginon CTF CORRECTION cisTEM 1.0 beta MODEL FITTING PHENIX MODEL FITTING Coot MODEL FITTING Rosetta INITIAL EULER ASSIGNMENT cisTEM 1.0 beta FINAL EULER ASSIGNMENT cisTEM 1.0 Beta CLASSIFICATION cisTEM 1.0 Beta RECONSTRUCTION cisTEM 1.0 Beta MODEL REFINEMENT PHENIX MODEL REFINEMENT Coot MODEL REFINEMENT Rosetta
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION Final reconstruction in cisTEM 3210917 cisTEM picking