7L50

Crystal structure of human monoacylglycerol lipase in complex with compound 4f

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		293	0.1M NaOAc pH 5.5, 32-38% MPD

Crystal Properties
Matthews coefficient	Solvent content
3.26	62.26

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 62.894	α = 90
b = 127.168	β = 73.673
c = 119.675	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS EIGER X 16M		2017-03-12	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	APS BEAMLINE 23-ID-B	1.0	APS	23-ID-B

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.3	49.06	98.9	0.123	0.143	0.072	0.994	4.1	3.9		79270

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.3	2.35	97.9		0.728	0.854	0.439	0.868		3.7

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	5ZUN	2.3	48.191	78322	3834	97.734	0.241	0.2392	0.2689	82.049

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-2.257		-2.694	-8.109		7.501

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	30.528
r_dihedral_angle_4_deg	15.903
r_dihedral_angle_3_deg	15.327
r_lrange_it	8.99
r_dihedral_angle_1_deg	5.96
r_scangle_it	4.708
r_mcangle_it	4.275
r_scbond_it	2.918
r_mcbond_it	2.564
r_angle_refined_deg	1.127
r_nbtor_refined	0.303
r_nbd_refined	0.214
r_symmetry_nbd_refined	0.201
r_symmetry_xyhbond_nbd_refined	0.129
r_xyhbond_nbd_refined	0.128
r_chiral_restr	0.088
r_bond_refined_d	0.004
r_gen_planes_refined	0.004

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	8864
Nucleic Acid Atoms
Solvent Atoms	157
Heterogen Atoms	132

Software

Software
Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
Aimless	data scaling
PHASER	phasing