7L22

Structure of chloride soak form of ArrX from Chrysiogenes arsenatis


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8.52930.2 M lithium chloride, 0.1 M Tris pH 8.5, 27% (w/v) PEG 3350
Crystal Properties
Matthews coefficientSolvent content
1.9135.46

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 52.896α = 90
b = 54.477β = 90
c = 90.844γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS EIGER X 16M2020-11-05MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAUSTRALIAN SYNCHROTRON BEAMLINE MX20.95372Australian SynchrotronMX2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.9246.72991202020389
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.921.970.857

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT6X6B1.92546.7220342100298.9830.1710.16850.213539.424
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.54.997-2.497
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.82
r_dihedral_angle_3_deg15.171
r_dihedral_angle_4_deg13.763
r_lrange_it8.371
r_lrange_other8.335
r_scangle_other6.343
r_scangle_it6.335
r_dihedral_angle_1_deg5.792
r_scbond_it4.173
r_scbond_other4.171
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.82
r_dihedral_angle_3_deg15.171
r_dihedral_angle_4_deg13.763
r_lrange_it8.371
r_lrange_other8.335
r_scangle_other6.343
r_scangle_it6.335
r_dihedral_angle_1_deg5.792
r_scbond_it4.173
r_scbond_other4.171
r_mcangle_it3.603
r_mcangle_other3.602
r_mcbond_it2.679
r_mcbond_other2.676
r_angle_refined_deg1.483
r_angle_other_deg1.326
r_symmetry_xyhbond_nbd_refined0.544
r_symmetry_nbd_refined0.215
r_xyhbond_nbd_refined0.213
r_nbd_other0.207
r_nbd_refined0.196
r_symmetry_nbd_other0.181
r_nbtor_refined0.17
r_symmetry_xyhbond_nbd_other0.136
r_symmetry_nbtor_other0.082
r_chiral_restr0.073
r_bond_refined_d0.009
r_gen_planes_refined0.007
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2023
Nucleic Acid Atoms
Solvent Atoms98
Heterogen Atoms5

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing