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Powassan virus Envelope protein DIII in complex with neutralizing Fab POWV-80
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1SVB 1SVB, 3UO1 experimental model PDB 3UO1 1SVB, 3UO1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.6 293.15 0.16M ammonium sulfate, 0.08M sodium acetate, 20% w/v glycerol, 16% w/v PEG 4000
Crystal Properties Matthews coefficient Solvent content 2.92 57.95
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.154 α = 90 b = 62.557 β = 97.97 c = 141.546 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CMOS RDI CMOS_8M 2019-03-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 4.2.2 1.00003 ALS 4.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 46.73 100 0.116 0.125 0.046 0.996 10.9 7.2 93018
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.05 100 0.532 0.577 0.222 0.888 6.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1SVB, 3UO1 2 46.67 1.34 92974 1082 99.9 0.191 0.19 0.1898 0.224 0.2239 33.89
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8202 Nucleic Acid Atoms Solvent Atoms 1088 Heterogen Atoms 2
Software Software Software Name Purpose PHENIX refinement Blu-Ice data collection XDS data processing Aimless data scaling PHASER phasing