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Refined structure of the C-terminal domain of DNAJB6b
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D HNCACB 0.2 mM [U-13C; U-15N] CTD, 20 mM sodium phosphate, 150 mM sodium chloride, 0.02 % v/v sodium azide 95% H2O/5% D2O 187 mM 6.7 1 atm 298 Bruker AVANCE III HD 600 6 HAHBCONH 0.2 mM [U-13C; U-15N] CTD, 20 mM sodium phosphate, 150 mM sodium chloride, 0.02 % v/v sodium azide 95% H2O/5% D2O 187 mM 6.7 1 atm 298 Bruker AVANCE III HD 600 2 3D HHC-NOESY 0.2 mM [U-13C; U-15N] CTD, 20 mM sodium phosphate, 150 mM sodium chloride, 0.02 % v/v sodium azide 95% H2O/5% D2O 187 mM 6.7 1 atm 298 Bruker AVANCE III HD 900 3 3D HCC-NOESY 0.2 mM [U-13C; U-15N] CTD, 20 mM sodium phosphate, 150 mM sodium chloride, 0.02 % v/v sodium azide 95% H2O/5% D2O 187 mM 6.7 1 atm 298 Bruker AVANCE III HD 700 7 CNH 13C-HMQC-NOESY-15N-HSQC 0.2 mM [U-13C; U-15N] CTD, 20 mM sodium phosphate, 150 mM sodium chloride, 0.02 % v/v sodium azide 95% H2O/5% D2O 187 mM 6.7 1 atm 298 Bruker AVANCE III HD 900 4 IPAP HSQC 0.2 mM [U-13C; U-15N] CTD, 20 mM sodium phosphate, 150 mM sodium chloride, 0.02 % v/v sodium azide, 4.2 % v/v C12E5 PEG, 11.6 mM Hexanol 95% H2O/5% D2O 187 mM 6.7 1 atm 298 Bruker AVANCE III HD 600 5 JMOD 1H13C HSQC 0.2 mM [U-13C; U-15N] CTD, 20 mM sodium phosphate, 150 mM sodium chloride, 0.02 % v/v sodium azide, 4.2 % v/v C12E5 PEG, 11.6 mM Hexanol 95% H2O/5% D2O 187 mM 6.7 1 atm 298 Bruker AVANCE III HD 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III HD 600 2 Bruker AVANCE III HD 700 3 Bruker AVANCE III HD 900
NMR Refinement Method Details Software simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 chemical shift assignment CcpNmr Analysis CCPN 3 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 5 peak picking NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax