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Cryo-EM structure of VCCN1 Y332A mutant in lipid nanodisc
Refinement RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.458 r_dihedral_angle_4_deg 20.772 r_lrange_it 17.524 r_lrange_other 17.509 r_dihedral_angle_3_deg 16.271 r_scangle_it 13.109 r_scangle_other 13.108 r_scbond_it 8.768 r_scbond_other 8.765 r_mcangle_it 8.522
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.458 r_dihedral_angle_4_deg 20.772 r_lrange_it 17.524 r_lrange_other 17.509 r_dihedral_angle_3_deg 16.271 r_scangle_it 13.109 r_scangle_other 13.108 r_scbond_it 8.768 r_scbond_other 8.765 r_mcangle_it 8.522 r_mcangle_other 8.515 r_mcbond_it 6.157 r_mcbond_other 6.148 r_dihedral_angle_1_deg 4.991 r_angle_refined_deg 1.871 r_angle_other_deg 1.711 r_ext_dist_refined_d 0.353 r_xyhbond_nbd_refined 0.199 r_nbd_refined 0.187 r_nbtor_refined 0.169 r_nbd_other 0.157 r_symmetry_nbd_other 0.155 r_symmetry_xyhbond_nbd_refined 0.154 r_symmetry_nbd_refined 0.106 r_symmetry_nbtor_other 0.081 r_chiral_restr 0.058 r_symmetry_xyhbond_nbd_other 0.023 r_bond_refined_d 0.015 r_gen_planes_refined 0.005 r_gen_planes_other 0.002 r_bond_other_d 0.001
Sample Bestrophin-like protein
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 107192 Reported Resolution (Å) 2.7 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C5
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 BIOQUANTUM (6k x 4k) Electron Dose (electrons/Å**2) 48
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION 3.1 CTF CORRECTION CTFFIND 4.1.13 INITIAL EULER ASSIGNMENT RELION 3.1 FINAL EULER ASSIGNMENT RELION 3.1 RECONSTRUCTION RELION 3.1
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION