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NMR solution structures of CAG RNA-DB213 binding complex
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 0.4 mM No RNA, 0.4 mM No Ligand, 10.0 mM No NaPi, 0.02 mM No DSS, 0.1 mM No EDTA 100% D2O 10.0 mM 7.0 1 bar 283 Bruker AVANCE 700 2 2D 1H-1H TOCSY 0.4 mM No RNA, 0.4 mM No Ligand, 10.0 mM No NaPi, 0.02 mM No DSS, 0.1 mM No EDTA 100% D2O 10.0 mM 7.0 1 bar 283 Bruker AVANCE 700 3 2D 1H-1H COSY 0.4 mM No RNA, 0.4 mM No Ligand, 10.0 mM No NaPi, 0.02 mM No DSS, 0.1 mM No EDTA 100% D2O 10.0 mM 7.0 1 bar 283 Bruker AVANCE 700
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 700
NMR Refinement Method Details Software simulated annealing Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 5 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 2 chemical shift assignment TopSpin Bruker Biospin