7BV9
The NMR structure of the BEN domain from human NAC1
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
2 | 2D 1H-13C HSQC | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
3 | 3D HNCO | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
4 | 3D HN(CA)CO | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
5 | 3D CBCA(CO)NH | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
6 | 3D HNCACB | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
7 | 3D C(CO)NH | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
8 | 3D HBHA(CO)NH | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
9 | 3D H(CCO)NH | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
12 | 3D CCH-TOCSY | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
10 | 3D HCCH-TOCSY | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
11 | 3D HCCH-COSY | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
14 | 3D 1H-15N NOESY | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
13 | 3D 1H-13C NOESY | 500 uM [U-13C; U-15N] BEN domain | 95% H2O/5% D2O | 70 mM | 6.0 | 1 atm | 298 | Bruker AVANCE 600 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
DGSA-distance geometry simulated annealing | Amber |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | Amber | 12 | Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman |
2 | structure calculation | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
3 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
4 | peak picking | NMRView | Johnson, One Moon Scientific | |
5 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
6 | processing | NMRDraw | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |