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Crystal structure of CHK1-10pt-mutant complex with compound 32
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 5OOP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 293 7% PEG 8000, 0.1 M MES buffer pH 6.5, 20% ethylene glycol
Crystal Properties Matthews coefficient Solvent content 2.34 47.54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.894 α = 90 b = 65.752 β = 99.88 c = 54.975 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CMOS BRUKER PHOTON 100 2014-10-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE BRUKER TURBO X-RAY SOURCE 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 22.3 99.8 0.115 8.7 5.1 21388
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 99.3 0.649 1.1 3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 5oop 2 20 20337 1030 99.76 0.192 0.1899 0.2001 0.2352 0.2399 RANDOM 33.568
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.39 0.15 -0.05 1.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.346 r_dihedral_angle_4_deg 19.535 r_dihedral_angle_3_deg 15.019 r_dihedral_angle_1_deg 6.365 r_angle_refined_deg 1.627 r_angle_other_deg 1.397 r_chiral_restr 0.085 r_bond_refined_d 0.01 r_gen_planes_refined 0.009 r_bond_other_d 0.001
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.346 r_dihedral_angle_4_deg 19.535 r_dihedral_angle_3_deg 15.019 r_dihedral_angle_1_deg 6.365 r_angle_refined_deg 1.627 r_angle_other_deg 1.397 r_chiral_restr 0.085 r_bond_refined_d 0.01 r_gen_planes_refined 0.009 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2047 Nucleic Acid Atoms Solvent Atoms 205 Heterogen Atoms 29
Software Software Software Name Purpose SAINT data reduction SAINT data scaling REFMAC refinement PDB_EXTRACT data extraction MOLREP phasing