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Human GSTO1-1 complexed with 2-chloro-N-(4-chloro-3-(N-isopropylsulfamoyl)phenyl)acetamide
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1EEM PDB entry 1EEM
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 277 1.7-2.2 M ammonium sulfate, 100 mM sodium citrate, 0.1 M sodium potassium tartrate, 0.75 mM zinc sulfate
Crystal Properties Matthews coefficient Solvent content 2.42 49.16
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.26 α = 90 b = 57.26 β = 90 c = 139.991 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210r 2018-11-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX1 0.95370 Australian Synchrotron MX1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.82 50 100 0.067 0.0021 0.999 25.5 10.5 24901 18.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.82 1.85 100 0.427 0.137 0.956 5.5 9.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB entry 1EEM 1.82 40.5 23575 1246 99.82 0.19381 0.19381 0.2004 0.23839 0.2484 RANDOM 25.677
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.63 0.31 0.63 -2.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.296 r_dihedral_angle_4_deg 21.307 r_dihedral_angle_1_deg 16.937 r_dihedral_angle_3_deg 15.98 r_lrange_it 8.269 r_lrange_other 8.074 r_scangle_it 2.054 r_angle_refined_deg 2.007 r_scangle_other 1.973 r_mcangle_it 1.638
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 29.296 r_dihedral_angle_4_deg 21.307 r_dihedral_angle_1_deg 16.937 r_dihedral_angle_3_deg 15.98 r_lrange_it 8.269 r_lrange_other 8.074 r_scangle_it 2.054 r_angle_refined_deg 2.007 r_scangle_other 1.973 r_mcangle_it 1.638 r_mcangle_other 1.638 r_angle_other_deg 1.485 r_scbond_it 1.384 r_scbond_other 1.179 r_mcbond_it 0.929 r_mcbond_other 0.928 r_chiral_restr 0.095 r_bond_refined_d 0.015 r_gen_planes_refined 0.011 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1922 Nucleic Acid Atoms Solvent Atoms 251 Heterogen Atoms 43
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction Aimless data scaling PHASER phasing