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selenomethionine derivative of ferulic acid esterase (FAE)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 293 20 mM Tris, 1 M sodium acetate, 10 mM Cd acetate, 5% glycerol
Crystal Properties Matthews coefficient Solvent content 3.07 59.92
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.519 α = 90 b = 108.373 β = 90 c = 112.949 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 4M 2018-12-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE MASSIF-3 0.9679 ESRF MASSIF-3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 49 98.5 0.117 0.05 0.996 11 5.2 73998
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.84 98.4 0.979 0.416 0.75 1.7 5.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION AB INITIO PHASING FREE R-VALUE 1.8 48.903 73935 3709 98.238 0.176 0.1749 0.1996 0.1874 19.758
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.334 0.253 0.082
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.08 r_dihedral_angle_4_deg 16.351 r_dihedral_angle_3_deg 11.876 r_dihedral_angle_1_deg 6.519 r_lrange_it 5.402 r_lrange_other 5.337 r_scangle_it 4.06 r_scangle_other 4.06 r_scbond_it 2.853 r_scbond_other 2.852
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.08 r_dihedral_angle_4_deg 16.351 r_dihedral_angle_3_deg 11.876 r_dihedral_angle_1_deg 6.519 r_lrange_it 5.402 r_lrange_other 5.337 r_scangle_it 4.06 r_scangle_other 4.06 r_scbond_it 2.853 r_scbond_other 2.852 r_mcangle_it 2.63 r_mcangle_other 2.63 r_mcbond_it 1.87 r_mcbond_other 1.869 r_angle_refined_deg 1.773 r_angle_other_deg 1.441 r_symmetry_nbd_refined 0.373 r_nbd_other 0.27 r_symmetry_xyhbond_nbd_refined 0.226 r_nbd_refined 0.218 r_symmetry_nbd_other 0.188 r_nbtor_refined 0.187 r_xyhbond_nbd_refined 0.178 r_metal_ion_refined 0.151 r_chiral_restr 0.089 r_symmetry_xyhbond_nbd_other 0.086 r_symmetry_nbtor_other 0.082 r_bond_refined_d 0.012 r_gen_planes_refined 0.012 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4568 Nucleic Acid Atoms Solvent Atoms 438 Heterogen Atoms 14
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling SHELXDE phasing