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Cryo-EM structure of a Phenuiviridae L protein
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 22.1675 f_angle_d 0.9818 f_chiral_restr 0.0601 f_bond_d 0.0117 f_plane_restr 0.0058
Sample Severe Fever with Thrombocytopenia Syndrome Virus L Protein
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE-PROPANE Sample Vitrification Details Blot for 2s using blotting force -10
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 220000 Reported Resolution (Å) 3.78 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol AB INITIO MODEL Refinement Target Overall B Value 225.217 Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 (6k x 4k) Electron Dose (electrons/Å**2) 59.45
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 500 Maximum Defocus (nm) 3000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 105000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version IMAGE ACQUISITION EPU 1.X IMAGE ACQUISITION Warp 1.0.7 IMAGE ACQUISITION RELION 3.0 CTF CORRECTION Gctf 1.18 INITIAL EULER ASSIGNMENT RELION 3.0 FINAL EULER ASSIGNMENT RELION 3.0 CLASSIFICATION RELION 3.0 RECONSTRUCTION RELION 3.0
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 780000 Particles were picked with Warp's pretrained agent BoxNet2Mask_20180918