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Crystal structure of the type III secretion pilotin InvH
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 4.6 303 80 mM cadmium chloride, 20% PEG 300, 400 mM NaCl, 100 mM sodium acetate
Crystal Properties Matthews coefficient Solvent content 1.91 35.45
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 25.503 α = 107.69 b = 53.183 β = 97.2 c = 56.851 γ = 95.95
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX-300 2016-03-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 0.980 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.2 44.36 94.5 0.998 11.1 3.9 82540
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.2 1.24 0.681
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.2 44.36 78427 4112 94.51 0.1341 0.1323 0.1326 0.168 0.1689 RANDOM 14.865
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.11 0.15 1.11 -0.37 0.74 1.21
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.262 r_dihedral_angle_4_deg 14.917 r_dihedral_angle_3_deg 14.026 r_rigid_bond_restr 7.381 r_dihedral_angle_1_deg 4.995 r_angle_refined_deg 1.914 r_angle_other_deg 1.704 r_chiral_restr 0.116 r_bond_refined_d 0.015 r_gen_planes_refined 0.011
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.262 r_dihedral_angle_4_deg 14.917 r_dihedral_angle_3_deg 14.026 r_rigid_bond_restr 7.381 r_dihedral_angle_1_deg 4.995 r_angle_refined_deg 1.914 r_angle_other_deg 1.704 r_chiral_restr 0.116 r_bond_refined_d 0.015 r_gen_planes_refined 0.011 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2461 Nucleic Acid Atoms Solvent Atoms 405 Heterogen Atoms 37
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling AutoSol phasing