☰ Navigation Tabs
NMR structure of Ost4 in DPC micelles
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 400 uM [U-13C; U-15N] Yeast Oligosaccharyltransferase subunit Ost4, 100 mM DPC micelle 90% H2O/10% D2O 400 mM 6.5 1 atm 308 Bruker AVANCE 800 2 3D HNCACB 400 uM [U-13C; U-15N] Yeast Oligosaccharyltransferase subunit Ost4, 100 mM DPC micelle 90% H2O/10% D2O 400 mM 6.5 1 atm 308 Bruker AVANCE 800 3 3D CBCA(CO)NH 400 uM [U-13C; U-15N] Yeast Oligosaccharyltransferase subunit Ost4, 100 mM DPC micelle 90% H2O/10% D2O 400 mM 6.5 1 atm 308 Bruker AVANCE 800 4 3D 1H-15N TOCSY 400 uM [U-13C; U-15N] Yeast Oligosaccharyltransferase subunit Ost4, 100 mM DPC micelle 90% H2O/10% D2O 400 mM 6.5 1 atm 308 Bruker AVANCE 800 5 3D 1H-15N NOESY 400 uM [U-13C; U-15N] Yeast Oligosaccharyltransferase subunit Ost4, 100 mM DPC micelle 90% H2O/10% D2O 400 mM 6.5 1 atm 308 Bruker AVANCE 700 6 3D 1H-15N NOESY 400 uM [U-13C; U-15N] Yeast Oligosaccharyltransferase subunit Ost4, 100 mM DPC micelle 90% H2O/10% D2O 400 mM 6.5 1 atm 308 Bruker AVANCE 800 7 3D HCCH-TOCSY 400 uM [U-13C; U-15N] Yeast Oligosaccharyltransferase subunit Ost4, 100 mM DPC micelle 90% H2O/10% D2O 400 mM 6.5 1 atm 308 Bruker AVANCE 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Varian INOVA 900 3 Bruker AVANCE 700 4 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment NMRFAM-SPARKY Lee, W., Tonelli, M., and Markley, J. L 4 peak picking NMRFAM-SPARKY Lee, W., Tonelli, M., and Markley, J. L 5 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax