Structure of the C-terminal domain of BCL-XL in membrane
SOLUTION NMR - SOLID-STATE NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 0.2 mM [U-99% 15N] C-terminal domain of BCL-XL | 90% H2O/10% D2O | 200 mM | 6.5 | 1 bar | 318 | Bruker AVANCE 600 |
| 2 | 3D HNCACB | 0.2 mM [U-99% 13C; U-99% 15N] C-terminal domain of BCL-XL | 90% H2O/10% D2O | 200 mM | 6.5 | 1 bar | 318 | Bruker AVANCE 600 |
| 3 | 3D H(CCO)NH | 0.2 mM [U-99% 13C; U-99% 15N] C-terminal domain of BCL-XL | 90% H2O/10% D2O | 200 mM | 6.5 | 1 bar | 318 | Bruker AVANCE 600 |
| 4 | 2D SLF | 4 mg/mL selectively 15N Leu labeled C-terminal domain of BCL-XL | 95% H2O/5% D2O | 200 mM | 6.5 | 1 bar | 318 | Bruker AVANCE 700 |
| 5 | 2D SLF | 10 mg/mL selectively 15N Leu labeled C-terminal domain of BCL-XL | 95% H2O/5% D2O | 200 mM | 6.5 | 1 bar | 318 | Bruker AVANCE 500 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 600 |
| 2 | Bruker | AVANCE | 500 |
| 3 | Bruker | AVANCE | 700 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | X-PLOR NIH | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 2 | data analysis | NMRView | Johnson, One Moon Scientific | |
| 3 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
| 4 | structure calculation | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
| 5 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |














