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NMR solution structure of SFTI-1 based plasmin inhibitor
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H TOCSY 1.5 mM SFTI-YKK 90% H2O/10% D2O TFA 3.5 Ambient Pa 298 Bruker AVANCE III 600 2 2D 1H-1H NOESY 1.5 mM SFTI-YKK 90% H2O/10% D2O TFA 3.5 Ambient Pa 298 Bruker AVANCE III 600 3 2D 1H-15N HSQC 1.5 mM SFTI-YKK 90% H2O/10% D2O TFA 3.5 Ambient Pa 298 Bruker AVANCE III 600 4 2D 1H-13C HSQC 1.5 mM SFTI-YKK 90% H2O/10% D2O TFA 3.5 Ambient Pa 298 Bruker AVANCE III 600 5 2D 1H-1H E.COSY 1.5 mM SFTI-YKK 90% H2O/10% D2O TFA 3.5 Ambient Pa 298 Bruker AVANCE III 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 600
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (medoid)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read 2 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment CcpNmr Analysis CCPN 4 peak picking CcpNmr Analysis CCPN 5 chemical shift calculation TALOS Cornilescu, Delaglio and Bax