6SX3

Intercalation of heterocyclic ligand between quartets in G-rich tetrahelical structure


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY0.35 mM VK2, 100 mM LiCl90% H2O/10% D2O100 mM6.01 atm273Agilent ASC Agilent Technologies Superconducting Magnet 600
22D 1H-1H NOESY0.35 mM VK2, 100 mM LiCl90% H2O/10% D2O100 mM6.01 atm273Agilent Oxford Superconducting Magnet 800
32D 1H-13C HSQC aromatic0.35 mM VK2, 100 mM LiCl90% H2O/10% D2O100 mM6.01 atm273Agilent ASC Agilent Technologies Superconducting Magnet 600
42D 1H-15N HSQC0.35 mM 10% Residue-specific labrelling VK2, 100 mM LiCl90% H2O/10% D2O100 mM6.01 atm273Agilent ASC Agilent Technologies Superconducting Magnet 600
52D 1H-15N HSQC0.35 mM 10% Residue-specific labrelling VK2, 100 mM LiCl90% H2O/10% D2O100 mM6.01 atm273Agilent Oxford Superconducting Magnet 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1AgilentASC Agilent Technologies Superconducting Magnet600
2AgilentOxford Superconducting Magnet800
NMR Refinement
MethodDetailsSoftware
simulated annealingAmber
simulated annealingAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMRVarian
2processingVNMRVarian
3chemical shift assignmentVNMRVarian
5data analysisSparkyGoddard
6structure calculationAmber18Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
7refinementAmber18Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman