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Homo sapiens WRB/CAML heterotetramer in complex with a TRC40 dimer
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3SJA
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 5.384 f_angle_d 0.752 f_chiral_restr 0.045 f_bond_d 0.005 f_plane_restr 0.005
Sample Homo sapiens WRB/CAML heterotetramer in complex with a TRC40 dimer Sample Components ATPase ASNA1 Tail-anchored protein insertion receptor WRB and calcium signal-modulating cyclophilin ligand
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 225244 Reported Resolution (Å) 4.2 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (3SJA) 2 Refinement Space REAL Refinement Protocol RIGID BODY FIT BACKBONE TRACE Refinement Target Overall B Value Fitting Procedure Details 3SJA
Data Acquisition Detector Type GATAN K2 QUANTUM (4k x 4k) Electron Dose (electrons/Å**2) 45.6
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 800 Maximum Defocus (nm) 2000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION Warp IMAGE ACQUISITION SerialEM CTF CORRECTION RELION 3.0 MODEL FITTING Coot CLASSIFICATION RELION 3.0 RECONSTRUCTION RELION 3.0 MODEL FITTING Coot MODEL REFINEMENT PHENIX
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 1698096