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Structural and functional characterisation of three novel fungal amylases with enhanced stability and pH tolerance
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 292 Natriumphosphate, Ammonium sulphate
Crystal Properties Matthews coefficient Solvent content 2.51 51.09
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.015 α = 90 b = 56.633 β = 90 c = 166.012 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2010-12-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.9795 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.2 48.9 99.8 0.021 14.1 7.6 150753 8.71
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.2 1.22 96.7 0.446 0.615 4.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.2 48.76 143033 7574 99.73 0.1109 0.1097 0.1079 0.1341 0.1324 RANDOM 13.363
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.34 -0.74 1.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.908 r_dihedral_angle_4_deg 15.734 r_dihedral_angle_3_deg 11.486 r_dihedral_angle_1_deg 6.709 r_rigid_bond_restr 4.712 r_angle_refined_deg 1.937 r_angle_other_deg 1.701 r_chiral_restr 0.115 r_bond_refined_d 0.016 r_gen_planes_refined 0.015
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.908 r_dihedral_angle_4_deg 15.734 r_dihedral_angle_3_deg 11.486 r_dihedral_angle_1_deg 6.709 r_rigid_bond_restr 4.712 r_angle_refined_deg 1.937 r_angle_other_deg 1.701 r_chiral_restr 0.115 r_bond_refined_d 0.016 r_gen_planes_refined 0.015 r_gen_planes_other 0.006 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3363 Nucleic Acid Atoms Solvent Atoms 568 Heterogen Atoms 134
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction XDS data reduction Aimless data scaling MOLREP phasing