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Solution NMR structure of the peptide 12530 from medicinal leech Hirudo medicinalis in dodecylphosphocholine micelles
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 1 mM peptide 12530, 100 mM dodecylphosphocholine 90% H2O/10% D2O 0 M 4 1 atm 303 Bruker AVANCE 800 2 2D 1H-1H TOCSY 1 mM peptide 12530, 100 mM dodecylphosphocholine 90% H2O/10% D2O 0 M 4 1 atm 303 Bruker AVANCE 600 3 2D 1H-15N HSQC 1 mM peptide 12530, 100 mM dodecylphosphocholine 90% H2O/10% D2O 0 M 4 1 atm 303 Bruker AVANCE 600 4 2D 1H-13C HSQC aliphatic 1 mM peptide 12530, 100 mM dodecylphosphocholine 90% H2O/10% D2O 0 M 4 1 atm 303 Bruker AVANCE 600 5 2D 1H-13C HSQC aromatic 1 mM peptide 12530, 100 mM dodecylphosphocholine 90% H2O/10% D2O 0 M 4 1 atm 303 Bruker AVANCE 600
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Bruker AVANCE 600
NMR Refinement Method Details Software torsion angle dynamics PSVS
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 structure calculation CYANA 3.98.5 Guntert, Mumenthaler and Wuthrich 2 chemical shift assignment CARA Keller and Wuthrich 4 collection TopSpin Bruker Biospin 5 peak picking CARA Keller and Wuthrich 6 processing TopSpin Bruker Biospin 7 data analysis TALOS Cornilescu, Delaglio and Bax 8 refinement PSVS Bhattacharya and Montelione