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METHYLMALONYL-COA MUTASE, 3-CARBOXYPROPYL-COA INHIBITOR COMPLEX
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1REQ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 pH 7.50
Crystal Properties Matthews coefficient Solvent content 2.74 48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 119.95 α = 90 b = 160.46 β = 105.01 c = 88.48 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 95 IMAGE PLATE MARRESEARCH MIRROR 1996-07-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ELETTRA BEAMLINE 5.2R ELETTRA 5.2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.16 99 98 0.05 0.05 15.1 3.3 170993 6 36
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.16 2.27 87.2 0.261 0.261 5.1 3.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1REQ 2.2 20 161381 7413 98.9 0.216 0.206 0.1946 0.263 0.2416 SAME AS 1REQ 36
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.73 0.82 -0.4 1.43
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 34.8 p_staggered_tor 17.1 p_scangle_it 5.6 p_scbond_it 4.3 p_mcangle_it 3.8 p_mcbond_it 2.9 p_planar_tor 2.8 p_multtor_nbd 0.189 p_chiral_restr 0.166 p_xhyhbond_nbd 0.15
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 34.8 p_staggered_tor 17.1 p_scangle_it 5.6 p_scbond_it 4.3 p_mcangle_it 3.8 p_mcbond_it 2.9 p_planar_tor 2.8 p_multtor_nbd 0.189 p_chiral_restr 0.166 p_xhyhbond_nbd 0.15 p_singtor_nbd 0.137 p_xyhbond_nbd 0.132 p_planar_d 0.055 p_angle_d 0.048 p_bond_d 0.016 p_plane_restr 0.006 p_angle_deg p_hb_or_metal_coord p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 20664 Nucleic Acid Atoms Solvent Atoms 1150 Heterogen Atoms 302
Software Software Software Name Purpose AMoRE phasing REFMAC refinement MOSFLM data reduction CCP4 data scaling