☰ Navigation Tabs
P38 alpha complex with AR117045
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 9 293 PEG 3000, Calcium Chloride, CHES
Crystal Properties Matthews coefficient Solvent content 2.26 45.65
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.351 α = 90 b = 73.99 β = 90 c = 77.671 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 2M 2011-12-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04-1 0.9173 Diamond I04-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.73 27.9 97.4 0.136 0.099 0.073 8.5 4.2 39035
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.73 1.77 82.1 2.072 2.575 1.378 0.5 2.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.73 27.9 36804 1947 96.41 0.20559 0.20346 0.2119 0.2463 0.2543 RANDOM 27.854
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.62 -0.39 1.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.996 r_dihedral_angle_4_deg 22.367 r_dihedral_angle_3_deg 15.363 r_dihedral_angle_1_deg 6.958 r_long_range_B_refined 5.457 r_long_range_B_other 5.424 r_scangle_other 3.861 r_mcangle_it 2.988 r_mcangle_other 2.988 r_scbond_it 2.426
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.996 r_dihedral_angle_4_deg 22.367 r_dihedral_angle_3_deg 15.363 r_dihedral_angle_1_deg 6.958 r_long_range_B_refined 5.457 r_long_range_B_other 5.424 r_scangle_other 3.861 r_mcangle_it 2.988 r_mcangle_other 2.988 r_scbond_it 2.426 r_scbond_other 2.425 r_mcbond_other 1.969 r_mcbond_it 1.968 r_angle_refined_deg 1.912 r_angle_other_deg 1.423 r_chiral_restr 0.094 r_bond_refined_d 0.014 r_gen_planes_refined 0.012 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2643 Nucleic Acid Atoms Solvent Atoms 157 Heterogen Atoms 62
Software Software Software Name Purpose REFMAC refinement xia2 data reduction SCALA data scaling REFMAC phasing