6Q2I
Solution state NMR structures of the RNA recognition motif (RRM) domain of human CstF-64
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D CBCA(CO)NH | 980 uM [U-100% 13C; U-100% 15N] RNA Recognition Motif | 90% H2O/10% D2O | 10 mM | 6 | 1 atm | 303 | Agilent DD2 600 |
2 | 3D HNCACB | 980 uM [U-100% 13C; U-100% 15N] RNA Recognition Motif | 90% H2O/10% D2O | 10 mM | 6 | 1 atm | 303 | Agilent DD2 600 |
3 | 3D HNCO | 980 uM [U-100% 13C; U-100% 15N] RNA Recognition Motif | 90% H2O/10% D2O | 10 mM | 6 | 1 atm | 303 | Agilent DD2 600 |
4 | 3D HN(CA)CO | 980 uM [U-100% 13C; U-100% 15N] RNA Recognition Motif | 90% H2O/10% D2O | 10 mM | 6 | 1 atm | 303 | Agilent DD2 600 |
5 | 2D 1H-1H TOCSY | 980 uM [U-100% 13C; U-100% 15N] RNA Recognition Motif | 90% H2O/10% D2O | 10 mM | 6 | 1 atm | 303 | Agilent DD2 600 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Agilent | DD2 | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | CS-ROSETTA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 10000 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | CcpNmr Analysis | 2.4.2 | CCPN |
3 | data analysis | NMRDraw | 9.6 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |
4 | peak picking | NMRDraw | 9.6 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |
5 | refinement | CS-ROSETTA | Shen, Vernon, Baker and Bax | |
6 | structure calculation | CS-ROSETTA | Shen, Vernon, Baker and Bax |