6POJ
STRUCTURAL REFINEMENT OF AQUAPORIN 1 VIA SSNMR
SOLID-STATE NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | HBR2 3D NCOCX | 2 w/v [U-13C; U-15N] AQUAPORIN 1 | NMR buffer | 10 mM NaCl | 7.0 | 1 atm | 278 | Bruker AVANCE 800 |
2 | HBR2 3D NCOCX | 2 w/v [U-13C; U-15N] AQUAPORIN 1 | NMR buffer | 10 mM NaCl | 7.0 | 1 atm | 278 | Bruker AVANCE 600 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | X-PLOR NIH |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR NIH | 2.48 | Schwieters, Kuszewski, Tjandra and Clore |
2 | collection | TopSpin | Bruker | |
3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | peak picking | CARA | Keller | |
5 | structure calculation | X-PLOR NIH | 2.48 | Schwieters, Kuszewski, Tjandra and Clore |
6 | chemical shift assignment | CARA | Keller and Wuthrich |