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Crystal structure of the p300 acetyltransferase domain with allosteric inhibitor CPI-090 and CoA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 9.5 277 0.1 M CHES pH 9.5, 30% w/v PEG 3000
Crystal Properties Matthews coefficient Solvent content 2.24 45.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.062 α = 90 b = 90.634 β = 90 c = 112.95 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2017-03-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 1.07812 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.32 90.63 99.2 0.126 0.146 0.056 0.996 10.8 6.6 29312
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.32 2.44 97.7 0.726 0.843 0.334 0.813 2.3 6.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.32 70.69 26296 1355 93.55 0.1866 0.1836 0.2473 0.2439 RANDOM 34.247
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.17 1 0.18
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.253 r_dihedral_angle_4_deg 15.225 r_dihedral_angle_3_deg 13.886 r_dihedral_angle_1_deg 6.647 r_angle_refined_deg 1.645 r_angle_other_deg 1 r_chiral_restr 0.092 r_bond_refined_d 0.013 r_gen_planes_refined 0.007 r_bond_other_d 0.002
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.253 r_dihedral_angle_4_deg 15.225 r_dihedral_angle_3_deg 13.886 r_dihedral_angle_1_deg 6.647 r_angle_refined_deg 1.645 r_angle_other_deg 1 r_chiral_restr 0.092 r_bond_refined_d 0.013 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5091 Nucleic Acid Atoms Solvent Atoms 86 Heterogen Atoms 138
Software Software Software Name Purpose Aimless data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-3000 data reduction PHASER phasing