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2.5 Angstrom structure of Caci_6494 from Catenulispora Acidiphila
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.3 298 1.4 M K2HPO4 0.07 M Na2H2PO4 pH 8.3 5% PEG 400
Crystal Properties Matthews coefficient Solvent content 4.8 74.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 159.26 α = 90 b = 159.26 β = 90 c = 159.26 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2016-03-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-F 0.97872 APS 21-ID-F
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 46.02 99.97 0.1958 28.48 21.7 23351 48.08
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.501 2.591 1.358
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.501 45.97 23351 2004 99.97 0.20422 0.20232 0.22456 0.2244 RANDOM 39.58
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.358 r_dihedral_angle_4_deg 21.029 r_dihedral_angle_3_deg 15.29 r_long_range_B_refined 9.883 r_long_range_B_other 9.878 r_scangle_other 8.317 r_dihedral_angle_1_deg 6.265 r_scbond_it 5.716 r_scbond_other 5.715 r_mcangle_other 5.196
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.358 r_dihedral_angle_4_deg 21.029 r_dihedral_angle_3_deg 15.29 r_long_range_B_refined 9.883 r_long_range_B_other 9.878 r_scangle_other 8.317 r_dihedral_angle_1_deg 6.265 r_scbond_it 5.716 r_scbond_other 5.715 r_mcangle_other 5.196 r_mcangle_it 5.194 r_mcbond_it 3.573 r_mcbond_other 3.56 r_angle_refined_deg 1.501 r_angle_other_deg 1.06 r_chiral_restr 0.084 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2228 Nucleic Acid Atoms Solvent Atoms 27 Heterogen Atoms 55
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling AutoSol phasing