☰ Navigation Tabs
Cryo-EM structure of Her2 extracellular domain-Trastuzumab Fab-Pertuzumab Fab complex
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 7.081 f_angle_d 1.174 f_chiral_restr 0.057 f_plane_restr 0.009 f_bond_d 0.008
Sample Her2 extracellular domain-Trastuzumab Fab-Pertuzumab Fab complex Sample Components Human HER2 extracellular domain Pertuzumab Fab Trastuzumab Fab
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 398409 Reported Resolution (Å) 4.36 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space REAL Refinement Protocol FLEXIBLE FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 45
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) -3500 Maximum Defocus (nm) -1500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 130000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cisTEM IMAGE ACQUISITION SerialEM CTF CORRECTION CTFFIND INITIAL EULER ASSIGNMENT cisTEM RECONSTRUCTION cisTEM MODEL REFINEMENT PHENIX
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 1032611