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LDHA structure in complex with inhibitor 14
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 292 30%PEG3350
0.1M HEPES
Crystal Properties Matthews coefficient Solvent content 2.2 44.05
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.125 α = 90 b = 80.968 β = 98.33 c = 103.214 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 193 PIXEL DECTRIS PILATUS3 6M 2012-07-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 0.97945 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.947 38.651 97.8 0.046 0.055 0.029 16.6 3.4 91115 91115
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Rrim I (All) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.95 2.05 95.9 0.491 0.491 0.583 0.31 1.6 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.95 50.01 89141 1830 97.9 0.1675 0.1665 0.1738 0.2151 0.2134 RANDOM 37.916
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.27 -1.47 2.2 -0.48
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.653 r_dihedral_angle_4_deg 21.211 r_dihedral_angle_3_deg 12.758 r_dihedral_angle_1_deg 5.713 r_angle_refined_deg 1.509 r_angle_other_deg 0.976 r_chiral_restr 0.172 r_gen_planes_refined 0.021 r_gen_planes_other 0.017 r_bond_refined_d 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.653 r_dihedral_angle_4_deg 21.211 r_dihedral_angle_3_deg 12.758 r_dihedral_angle_1_deg 5.713 r_angle_refined_deg 1.509 r_angle_other_deg 0.976 r_chiral_restr 0.172 r_gen_planes_refined 0.021 r_gen_planes_other 0.017 r_bond_refined_d 0.01 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10065 Nucleic Acid Atoms Solvent Atoms 721 Heterogen Atoms 334
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction XDS data reduction PHASER phasing